Glyco-DIA
Link
Collection of Glyco-DIA Libraries-->(2.076 glycoproteins, 11.452 unique O-GalNAc type glycopeptides and five most common core 1 O-glycan structures: Tn, T, SiaTn, SiaT and diSiaT)
| Glyco/DIA WorkFlow |
Library ID (link) |
Description |
 |
HEK_SC_Comprehensive |
Multiple MS runs (high pH reverse phase fractionated) in HCD-MS2 DDA mode, LWAC VVA enriched samples from HEK SC. |
| HEK_SC_Single_SingleRun |
Single MS run in HCD-MS2 DDA mode, LWAC VVA enriched samples from HEK SC. |
| HEK_WT_Comprehensive |
Multiple MS runs (high pH reverse phase fractionated) in HCD-MS2 DDA mode, LWAC Jacalin enriched samples from HEK293 WT. |
| HepG2_SC_Comprehensive |
Multiple MS runs (high pH reverse phase fractionated) in HCD-MS2 DDA mode, LWAC VVA enriched samples from HepG2 SC. |
| HepG2_SC_Secretome_SingleRun |
Single MS run in HCD-MS2 DDA mode, LWAC VVA enriched samples from HEK SC secretome. |
| HepG2_SC_SingleRun |
Single MS run in HCD-MS2 DDA mode, LWAC VVA enriched samples from HEK SC. |
| HepG2_WT_Comprehensive |
Multiple MS runs (high pH reverse phase fractionated) in HCD-MS2 DDA mode, LWAC Jacalin enriched samples from HepG2 WT. |
| HepG2_WT_SingleRun |
Single MS run in HCD-MS2 DDA mode, LWAC Jacalin enriched samples from HepG2 WT. |
| M3T4_SC_Comprehensive |
Multiple MS runs (high pH reverse phase fractionated) in HCD-MS2 DDA mode, LWAC VVA enriched samples from M3T4 SC. |
| OVCAR3_SC_Comprehensive |
Multiple MS runs (high pH reverse phase fractionated) in HCD-MS2 DDA mode, LWAC VVA enriched samples from OVCAR3 SC. |
| Serum_DIA_Comprehensive |
Multiple MS runs (with and without Top2 depletion, high pH reverse phase fractionated) in HCD-MS2 DDA mode, LWAC Jacalin enriched samples from human serum. |
| In Silico Library ID |
|
| Original T and Tn structures expanded towards> SiaTn, SiaT and diSiaT |
Due to the limitation of file size on GitHub, we share all the in silico libraries on GoogleDrive |